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Electroporation biopsy - QuickField simulation example

The performed numerical simulations allow to get an initial understanding of tissue areas from which e-biopsy could potentially collect the intracellular molecular markers released by electroporation. If the electric field strength thresholds for the tissues are known, the developed simulations could indicate the fractions of tumors that are electropermeabilized.

Engineering question

How to find electric field in electroporation biopsy electrodes?

Answer
Set up a plane-parallel QuickField Electrostatics problem for electroporation biopsy electrodes and evaluate electric field distribution from computed field results.

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Typical applications
biopsy electroporation electrodes, medical needle electrode arrays, electrochemotherapy probes

Electroporation biopsy

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Simulation problem

Problem Type
Plane-parallel multiphysics problem of DC Conduction coupled to Heat Transfer.

Geometry
Electroporation biopsy A metal needle electrode is inserted into the live tissue Brain Melanoma tumor 10 mm 15 mm U+ Ground Model A Model B Model C 5 mm 5 mm 5 mm

Given
Brain electrical conductivity 0.258 S/m, melanoma electrical conductivity 0.43 S/m.
Reversible and irreversible electroporation thresholds for the brain are 500 V/cm and 700 V/cm respectively.
E-biopsy was performed using a combination of high-voltage short pulses 1000 V @ 40 μs with low-voltage long pulses 50 V @ 15 ms.
Pulses frequency is 4 Hz, number of pulses is 40.
Electric and thermal properties of the mice healthy brain tissue and melanoma tissue used in numerical simulations you can find here: https://doi.org/10.1371/journal.pone.0265866.s001

Task
Study the distributions of the electric fields in the brain tissue at different positions of the needle electrode.

Results
Electric field distribution:
Electric field distribution during the application of pulsed electric fields for e-biopsy

Joule heating of the brain during the application of pulsed electric fields for e-biopsy
Joule heating of the brain during the application of pulsed electric fields for e-biopsy

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